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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792436.1_cds_XP_016512225.1_2412
CDS Infomation

[gene=LOC107829263] [db_xref=GeneID:107829263] [protein=shaggy-related protein kinase NtK-1-like] [protein_id=XP_016512225.1] [location=join(15177..15290,15419..15511,15745..15804,15928..16200,16554..16628,17869..17925,18021..18161,18269..18319,19974..20069,20162..20245,21097..21199,21286..21368)] [gbkey=CDS]
Sequence

ATGGCTTCTGTGGGCTTAGCACCTACGTCGGGTTTGAGAGAATCTAGTGGCCATAATGCT
GGGGTAGATAGATTGCCTGAGGAGATGAATGACATGAGAATCAGGGATGATAAGGAAATG
GAAGCAGCAATTGTCGATGGTAATGGGACTGAGACGGGCCACATAATCGTGACAACTATT
GGTGGTAGAAATGGCCAGGCAAAACAGACTATTAGTTATATGGCTGAACGTGTTGTTGGA
CAAGGATCATTTGGAGTAGTGTTTCAGGCAAAATGCTTAGAGACTGGTGAAACAGTTGCC
ATAAAGAAGGTTCTTCAAGACAAGAGATATAAGAACAGGGAGTTGCAGACCATGCGTCTT
CTTGACCACCCTAATGTTGTCTCTCTGAAACACTGCTTCTTTTCGACAACTGACAAGGAT
GAACTATATCTTAACTTGGTACTTGAGTATGTCCCTGAAACTGTTCACCGTGTTATCAAA
CACTACAATAAGCTGAACCAAAGGATGCCATTGATACTTGTGAAGCTTTATACATATCAG
ATTTTCAGGGCGCTGTCTTACATACACCGCACTATTGGAGTGTGCCACAGGGACATCAAA
CCTCAGAATCTTTTGGTGAACCCACATACCCACCAGGTCAAGTTATGCGATTTTGGGAGT
GCTAAAGTTCTGGTTAAAGGAGAACCAAATATTTCTTACATCTGCTCTAGGTATTACAGA
GCACCTGAGCTCATATTTGGTGCAACAGAGTACACTACTGCTATTGACATCTGGTCTGCT
GGCTGTGTCCTAGCTGAGCTACTTCTTGGTCAGCCTCTGTTTCCCGGTGAAAGTGGAGTT
GACCAGCTTGTTGAGATCATTAAGGTTTTGGGCACTCCTACAAGAGAAGAAATTAAATGT
ATGAATCCCAACTACAATGAGTTTAAGTTTCCTCAAATTAAAGCTCATCCATGGCACAAG
ATATTTCATAAGCGCATGCCTCCAGAAGCTGTTGATCTTGTCTCAAGATTGCTGCAGTAC
TCTCCTAACTTGCGTTGTGCTGCTTTGGATGCCTTGACTCACCACTTTTTTGATGAGCTT
CGTGATCCCAATACACGCCTGCCTAATGGACGTTTCCTTCCTCCCTTATTTAACTTTAAG
GCTCACGAGTTGAAGAACGTGCATGCAGAGACATTATTGAAGTTGGTTCCAGAGCACGCC
AGAAAACAGTGCCCGTCCCTTGGGTTATGA

Peptide Sequence

PEP ID

XP_016512225.1
PEP Infomation

PREDICTED: shaggy-related protein kinase NtK-1-like [Nicotiana tabacum]
Sequence

MASVGLAPTSGLRESSGHNAGVDRLPEEMNDMRIRDDKEMEAAIVDGNGTETGHIIVTTI
GGRNGQAKQTISYMAERVVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRL
LDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLILVKLYTYQ
IFRALSYIHRTIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR
APELIFGATEYTTAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC
MNPNYNEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCAALDALTHHFFDEL
RDPNTRLPNGRFLPPLFNFKAHELKNVHAETLLKLVPEHARKQCPSLGL

Transcript Sequence

Gene sequence data has not been registered.